Can confirm those first two occasions in scav apartmant. Didn't checked other two spots in garage (not my playstyle).I'm at the beginning of the game. During the quest "The Rescue", there is still some money that I can't grab. It's the same thing with some other objects like a pack of cards. I'm still not sure if I can grab more junks in this version of the game. That being said, I'm glad to report that the elevator doors open when Jackie approach them.
Patch has however fixed this issue in other places on the world. Not very far in my game yet but NCPD blue star mission where there are items under a parked car. Items couldn't be picked with earlier game version, but now they can. There's an empty backpack under that car and I'm not sure if it's meant to present that lootable items were originally inside of if there's supposed to be something in it. Backpack item is IIRC rarely present in game world without any items to loot, ie I have considered it's to be alternate graphical presentation for loot containers in general in scenarios where backpack makes more sense than a box (people don't carry a box with them, they use backpacks).