Just like with inventory management not being CDPRs stronges suites, so are not the character building and balancing of perks/skills/builds/whatever. For me CDPR games are incredible story and character driven experiences, that come with a character skill customization and loot management system attached and dangling somewhere fairly low on their priority list. I got used to the not so good inventory and skill system in the witcher series and came to CP2077 not expecting anything revolutionary and was not disappointed.
It is all adequate. Yeah, some skills do definitely not work as intended (or not at all) at the moment and will be fixed at some point, hopefully in the first big update in January. No matter what perks you choose, you will always be able to complete the game and experience what is the point of CDPR games: the story, characters, the world and the quests.